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Reconciling transfers between accounts

I have three accounts set up on FreeAgent: My company current account, Business Investment Account and Paypal account.

An issue has come up where I make transfers between the accounts.

If I import the bank statement for the current account, and explain some of the transactions as transfers, this then creates balancing transactions on the other account.

However, when I import the statements for the BIA or Paypal accounts, I end up with 'duplicate' unexplained entries for the transfers. This is made more difficult by the fact that - especially with Paypal - there will be a couple of days difference between the credit being applied to one account and the debit on the other account.

There doesn't seem to be an obvious workaround for this - if I delete the 'extra' transfer transactions, this leaves unexplained transactions on the source account.

My accountant will want to see each of the accounts reconciled to the appropriate bank statements.

Any suggestions??

Thanks,
Russell.
 
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