vat not showing up in the reclaimed section of return

VAT is showing up on the VAT returns based on my turnover, but not for my expenses, I have input over 100 invoices and no VAT Retrurns are showing my VAT to reclaim.

I noticed when i was creating Bills and allowing "Auto Vat" after the bill was created it showed "includes Vat of £amount" but then when you go into banking and choose the correct method of payment for the bill, when you drop down the box the "auto" button disappears and after you have paid invoice some dont show the "Including Vat £amount"

Please can someone look into my account and tell me what is wrong teesweb.freeagent